We propose a new way to answer probabilistic queries that span multiple datapoints. We formalize reasoning about the similarity of different datapoints as the evaluation of the Bayes Factor within a hierarchical deep generative model that enforces a …
Amortized variational inference (AVI) replaces instance-specific local inference with a global inference network. While AVI has enabled efficient training of deep generative models such as variational autoencoders (VAE), recent empirical work …
Gaussian state space models have been used for decades as generative models of sequential data. They admit an intuitive probabilistic interpretation, have a simple functional form, and enjoy widespread adoption. We introduce a unified algorithm to …
We describe a method for parameter estimation in bipartite probabilistic graphical models for joint prediction of clinical conditions from the electronic medical record. The method does not rely on the availability of gold-standard labels, but rather …
Electronic medical records (EMRs) hold a tremendous amount of information about patients that is relevant to determining the optimal approach to patient care. As medicine becomes increasingly precise, a patientâs electronic medical record phenotype …
We present a semi-supervised learning algorithm for learning discrete factor analysis models with arbitrary structure on the latent variables. Our algorithm assumes that every latent variable has an \"anchor\", an observed variable with only that …
Kalman Filters are one of the most influential models of time-varying phenomena. They admit an intuitive probabilistic interpretation, have a simple functional form, and enjoy widespread adoption in a variety of disciplines. Motivated by recent …
Chronic diseases, such as Alzheimer's Disease, Diabetes, and Chronic Obstructive Pulmonary Disease, usually progress slowly over a long period of time, causing increasing burden to the patients, their families, and the healthcare system. A better …
We present a novel framework for learning to estimate and predict clinical state variables without labeled data. The resulting models can used for electronic phenotyping, triggering clinical decision support, and cohort selection. The framework …